Archive for the 'Academics' category

Nth year postdocs do not appreciate new grad students being put on the project

Oct 05 2015 Published by under Academics

2 responses so far

Glam cost

Sep 24 2015 Published by under #FWDAOTI, Academics, Careerism, Fixing the NIH

How much do you think it costs to generate the manuscript that is accepted for publication at your average Glam journal?

How do you align this with your views on fair distribution of research funding?

52 responses so far

Repost: A Conversation About the Environment score criterion

Aug 05 2015 Published by under Academics, Ask DrugMonkey

This was originally published July 21, 2010.

After NIGMS Director Berg notified me of his most recent regression analysis of the individual criterion scores, the good Comrade PhysioProf had a conversation. As is our wont. It went something like this.

Comrade PhysioProf: The most interesting thing of all the correlations was that investigator and environment are so highly correlated.

Your Humble Narrator: I'm not really surprised. I find environment to be a throw away consideration on panels I've been on. people don't generally propose to do something for which major infrastructure is absent!

CPP: On my last R01 review and my post-doc's NRSA, they waxed poetic about the fucking environment. In the applications, we went on and on about the scientific environment and named a number of specific faculty members whose expertise would be drawn upon blah, blah, blah. I think that shit can actually work.

YHN: Christ what a load of shit

CPP: Dude, it's true! We have an outstanding environment! The food trucks outside the med school are some of the finest in all of biomedical research!

CPP: How funny would it be to actually put that in the facilities sections of an application? "The "Alibertos" food truck is only steps away from our laboratory and provides a level of energy dense food that contributes substantially to the likelihood of success of the proposed specific aims."

YHN: "The "Alibertos" truck returns in evening hours at 6 and 10 pm so that trainees need not leave the lab until 12pm, thus maximizing throughput for these studies"

CPP: I just looked at the instructions for the new application format, and that would actually go in the "Resources" section.

YHN: HAHHAHHAHAAAHAH, you are such a grant geek!!!!!


Additional Reading:

7 responses so far

Teacher Draft

Aug 04 2015 Published by under Academics

Yeah, I wish....

5 responses so far

The stuff a liberal arts college education stamps out of you (if you still need it)

Jul 08 2015 Published by under #FWDAOTI, Academics

A: "Strong assertion that this thing should be so!"

B: "What is the basis for your assertion?"

A: "hmmmina..hummina....umm WHAT IS THE BASIS FOR YOUR COUNTER CLAIM????"

I weep for science some days people. I really do.

28 responses so far

Career truth from the Twitterz

Jun 02 2015 Published by under Academics

10 responses so far

Stupid CV Tricks: Is a job talk an invited seminar?

May 27 2015 Published by under Academics, Careerism, Conduct of Science

My esteemed colleague says no:

My view is that a job talk is more prestigious than a mere invited seminar due to the focal competition and review.

So sure, put those down in the same CV category as non-job-talk seminar invitations.

43 responses so far

Why are you a scientist? 

Apr 27 2015 Published by under Academics, Careerism, Conduct of Science

From the Twitts.....

Me, I think I never got past "I wonder what that does?" 

33 responses so far

Patricia Arquette, Privilege and the Oppression Olympics

Feb 23 2015 Published by under Academics, AntiFeminist Asshole

I was watching the Oscars last night when Patricia Arquette busted out some equal-pay feminism in her acceptance speech.

"To every woman who gave birth, to every taxpayer and citizen of this nation, we have fought for everybody else's equal rights," Arquette said, her voice intensifying. "It is our time to have wage equality once and for all and equal rights for women in the United States of America!"


I was hooting and hollering too much, I assume, because I got shushed. Apparently some other people in the room wanted to hear what else was being said or whatever.

So it was with some confusion that I saw backlash later on the Twitts about her. It seemed to be of the intersectionality sort of criticism. Also known as the Oppression Olympics. Not to make light of it but look, we all come with various attributes that confer privileges upon us in this society we inhabit. Most of us have one or two attributes that confer the opposite. Some unlucky folks have a pretty tough menu of biases slanting against them. So yeah, there seemed to be a drumbeat of Twitterage against Patricia Arquette's immense privilege of wealth, whiteness and heteronomativity. I thought at first that this was undeserved, based on what she said from the's the Oscars for goodness sake, of course they are all white and perfect and immensely rich.

Then today I finally happened upon her expanded backstage comments. From this account:

"The truth is: even though we sort of feel like we have equal rights in America, right under the surface, there are huge issues that are applied that really do affect women," she mused. "And it's time for all the women in America and all the men that love women, and all the gay people, and all the people of color that we've all fought for to fight for us now."

Breathtakingly tone-deaf.

Look, I've spent a lot of time in my life feeling sorry for myself. I get it. It is really, really easy to focus narrowly on that one aspect, attribute, experience, factor or misfortune that leaves the self at apparent disadvantage. And it is correspondingly easy to forget all about all the other factors and attributes that have conveyed immense privileges upon our lives.

This is not solved by the data, of course. Firstly, because we can all pick and choose which truthy stat we want to brandish. Is it equal pay? Very easy to brandish the generally accepted, broad brush stats for men versus women. And very easy to ignore that women of color are even more screwed than woman not of color. Easy to have no idea whatsoever how well minority men are paid relative to women not of color. Or what being gay confers in terms of salary.

And it is incredibly seductive to argue the anecdote. Well, Oprah! And J.Lo. And Eddie Murphy! And FFS Neil Patrick Harris is the Master of Ceremonies for goodness sake! They are sitting right there, so therefore why would anyone think of how their respective skin tones and desired life-partner would have anything to do with equal pay for women, eh?

Academic science is no different my friends. If this highly public case makes the intersectionality issue clearer to you than it has ever been, do try to turn that inwards.

We run across these examples on the blog all the time, of course. Whether we're discussing the struggles of women in science, the Ginther report, outing yourself to search committees or thesis advisors, the Baby Boomer hegemony of NIH Grant funding, postdoctoral pay rates or the evils of PIs with too many grants, the issues are the same.

"Sure, sure, there are these other biases in careers. But what is REALLY important is that I, the speaker, haven't experienced* any of those advantages that adhere to my classes and characteristics. And let me tell you about my specific set of life events that prove that really, I personally have been at huge disadvantage. So it is totally misplaced to talk about the general advantages of my characteristic X because the anecdote of me proves that X is much less important than this totally other thing that I happen to suffer from."

At this point one or the other of you, DearReader, may suspect I am talking about you in particular. Naturally, I am not. This is a common theme. Very common.

It is something that I have suffered from in my life and continue to do so. I have felt immensely sorry for myself a lot over the years.

Like many of you, I can claim one or two disadvantages within a context of immense privileges when it comes to pursuing the career of academic science. Like many of you, I CANNOT HELP BUT IGNORE MY PRIVILEGES AND PITY MYSELF ABOUT MY HARDSHIPS. Like many of you, I feel compelled to speak out about perceived injustices in the world. Like many of you, some of those injustices I speak about happen to be ones that I think affect me. Like many of you, some of those injustices I speak about do not happen to affect me in any direct way.

And, like many of you and Patricia Arquette, I often speak about injustices in a way that appears to ignore the fact that other people have it a lot worse.

Social media has a way of helping us to remember that other people have it even worse. And that trying to recruit others to help you in your fights, without ever appearing** to be that concerned about their fights comes across as selfish and tone deaf.

*of course you have, you just think that this is totally normal and average and deserved, and thus not worthy of inclusion in any discussion.

**For all I know Patricia Arquette is a huge fighter for underrepresented groups, including ethnic minorities and LGBT folks. But her comments certainly didn't convey that.

The tldr; version of this post:

7 responses so far

Supplementary Materials practices rob authors of citation credit

This is all the fault of qaz. And long time reader Nat had a blog post on this ages ago.

First, I shouldn't have to remind you all that much about a simple fact of nature in the academic crediting system. Citations matter. Our quality and status as academic scientists will be judged, in small or in large ways, by the citations that our own publications garner.

This is not to say the interpretation of citations is all the same because it most assuredly is not. Citation counting leads to all sorts of distilled measures across your career arc- Highly Cited and the h-index are two examples. Citation counting can be used to judge the quality of your individual paper as well- from the total number of cites, to the sustained citing across the years to the impressive-ness of the journals in which your paper has been cited.

Various stakeholders may disagree over which measure of citation of your work is most critical.

On one thing everyone agrees.

Citations matter.

One problem (out of many) with the "Supplementary Materials", that are now very close to required at some journals and heavily encouraged at others, is that they are ignored by the ISI's Web of Science indexing and, so far as I can tell, Google Scholar.

So, by engaging in this perverted system by which journals are themselves competing with each other, you* are robbing your colleagues of their proper due.

Nat observed that you might actually do this intentionally, if you are a jerk.

So now, not only can supplementary info be used as a dumping ground for your inconclusive or crappy data, but you can also stick references to your competitors in there and shaft them their citations.

Try not to be a jerk. Resist this Supplementary Materials nonsense. Science will be the better for it.

*yes, this includes me. I just checked some Supplementary citations that we've published to see if either ISI or Google Scholar indexes them- they do not.

25 responses so far

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